CGN ROI

Return to index

Inheritance graph

Defined in file : brainvisa/toolboxes/baby/types/PipeBaby.py

Used in the following processes

Brain Detection
Brain Detection (Utrecht)
Manual Drawing of Cerebellum and Segmentation of Central Grey Nuclei from 2 Orthogonal Slices
Pipeline Baby
Segmentation of Cerebellum, Central Grey Nuclei and Ventricules (Utrecht)
Simplified Brain Detection (Utrecht)

Associated formats

Aperio svs
BMP image
BrainVISA volume formats
DICOM image
Directory
ECAT i image
ECAT v image
FDF image
FreesurferMGH
FreesurferMGZ
GIF image
GIS image
gz compressed MINC image
gz compressed NIFTI-1 image
Hamamatsu ndpi
Hamamatsu vms
Hamamatsu vmu
JPEG image
Leica scn
MINC image
NIFTI-1 image
PBM image
PGM image
PNG image
PPM image
Sakura svslide
SPM image
TIFF image
TIFF(.tif) image
Ventana bif
VIDA image
XBM image
XPM image
Zeiss czi

Associated ontology rules

  • brainvisa-3.2.0 :
    • {center}/{subject}/t1mri/{acquisition}/{analysis}/RCGN_<subject>
    {center}/{subject}/t1mri/{acquisition}/{analysis}/LCGN_<subject>
  • brainvisa-3.1.0 :
    • {protocol}/{subject}/t1mri/{acquisition}/{analysis}/RCGN_<subject>
    {protocol}/{subject}/t1mri/{acquisition}/{analysis}/LCGN_<subject>

    Key attributes

  • brainvisa-3.2.0 :
    • rescan ,  acquisition_date ,  time_point ,  time_duration ,  center ,  subject ,  acquisition ,  analysis ,  side
  • brainvisa-3.1.0 :
    • protocol ,  subject ,  acquisition ,  analysis ,  side